Population Genomics

Type | Start | End |
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Internal | Jan 2021 | Jul 2022 |
Responsible | URL |
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Xavier Giro-i-Nieto |
Description
Figure by Matt Howard - Argonne's Midwest Center for Structural Genomics deposits 1,000th protein structure, CC BY-SA 2.0, https://commons.wikimedia.org/w/index.php?curid=9752165
Joint collaboration with Dr. Alexander Ioannidis and Dr. Daniel Mas-Montserrat from Stanford University.
Publications
Adversarial Learning for Feature Shift Detection and Correction. In: Neural Information Processing Systems (NeurIPS). Neural Information Processing Systems (NeurIPS). New Orleans, USA; In Press. | .
Neural ADMIXTURE: rapid population clustering with autoencoders. Nature Computational Science. In Press . | .
SALAI-Net: species-agnostic local ancestry inference network. Bioinformatics. 2022 ;38. | .
Predicting Dog Phenotypes from Genotypes. In: 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). ; 2022.![]() |
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Generative Moment Matching Networks for Genotype Simulation. In: 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). ; 2022.![]() |
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Machine Learning for Genomic Sequence Processing. ( ).; 2022. | .
Ancestry-conditioned Generative Models for Genotyping. ( ).; 2022. | .
Deep variational autoencoders for population genetics: applications in classification, imputation, dimensionality reduction, and novel lossless data compression. In: American Society of Human Genetics (ASHG). American Society of Human Genetics (ASHG). Virtual: ASHG; 2021. | .
Neural ADMIXTURE: rapid population clustering with autoencoders. In: 2021 Society for Molecular Biology & Evolution meeting (SMBEv2021). 2021 Society for Molecular Biology & Evolution meeting (SMBEv2021). Virtual; 2021.![]() |
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Unsupervised learning with applications in genomic . 2021 ;BSc Data Science Engineering. | .
Pages
Collaborators
Xavier Giró | Associate Professor | xavier.giro@upc.edu |