Population Genomics

Type	Start	End
Internal	Jan 2021	Jul 2022

Responsible	URL
Xavier Giro-i-Nieto

Description

Figure by Matt Howard - Argonne's Midwest Center for Structural Genomics deposits 1,000th protein structure, CC BY-SA 2.0, https://commons.wikimedia.org/w/index.php?curid=9752165

Joint collaboration with Dr. Alexander Ioannidis and Dr. Daniel Mas-Montserrat from Stanford University.

Publications

Barrabés M, Mas-Montserrat D, Geleta M, Giró-i-Nieto X, Ioannidis AG. Adversarial Learning for Feature Shift Detection and Correction. In: Neural Information Processing Systems (NeurIPS). Neural Information Processing Systems (NeurIPS). New Orleans, USA; In Press.

Dominguez A, Mas-Montserrat D, Bustamante C, Giró-i-Nieto X, Ioannidis AG. Neural ADMIXTURE: rapid population clustering with autoencoders. Nature Computational Science. In Press .

Bernal O, Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. SALAI-Net: species-agnostic local ancestry inference network. Bioinformatics. 2022 ;38.

Bartusiak E, Barrabés M, Rymbe A, Gimbernat J, López C, Barberis L, Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. Predicting Dog Phenotypes from Genotypes. In: 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). ; 2022.

(1.17 MB)

Mas-Montserrat D, Perera M, Barrabés M, Geleta M, Giró-i-Nieto X, Ioannidis AG. Generative Moment Matching Networks for Genotype Simulation. In: 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). ; 2022.

(2.95 MB)

Barrabés M. Machine Learning for Genomic Sequence Processing. (Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG).; 2022.

Perera M. Ancestry-conditioned Generative Models for Genotyping. (Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG).; 2022.