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Author Title [ Type(Asc)] Year
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Barrabés M. Machine Learning for Genomic Sequence Processing. Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. 2022 .
Perera M. Ancestry-conditioned Generative Models for Genotyping. Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. 2022 .
Ms Thesis
Geleta M. Unsupervised learning with applications in genomic. Mas-Montserrat D, Ioannidis AG, Giró-i-Nieto X. 2021.
Oriol B. Species-agnostic Local Ancestry Inference on Genomic Data with Convolutions. Mas-Montserrat D, Ioannidis AG, Giró-i-Nieto X. 2021.
Journal Article
Bernal O, Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. SALAI-Net: species-agnostic local ancestry inference network. Bioinformatics. 2022;38.
Dominguez A, Mas-Montserrat D, Bustamante C, Giró-i-Nieto X, Ioannidis AG. Neural ADMIXTURE: rapid population clustering with autoencoders. Nature Computational Science. In Press;.
Conference Paper
Bartusiak E, Barrabés M, Rymbe A, Gimbernat J, López C, Barberis L, et al.. Predicting Dog Phenotypes from Genotypes. In 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 2022.  (1.17 MB)
Dominguez A, Mas-Montserrat D, Bustamante C, Giró-i-Nieto X, Ioannidis AG. Neural ADMIXTURE: rapid population clustering with autoencoders. In 2021 Society for Molecular Biology & Evolution meeting (SMBEv2021). Virtual; 2021.  (1.76 MB)
Mas-Montserrat D, Perera M, Barrabés M, Geleta M, Giró-i-Nieto X, Ioannidis AG. Generative Moment Matching Networks for Genotype Simulation. In 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 2022.  (2.95 MB)
Geleta M, Mas-Montserrat D, Bustamante C, Giró-i-Nieto X, Ioannidis AG. Deep variational autoencoders for population genetics: applications in classification, imputation, dimensionality reduction, and novel lossless data compression. In American Society of Human Genetics (ASHG). Virtual: ASHG; 2021.
Barrabés M, Mas-Montserrat D, Geleta M, Giró-i-Nieto X, Ioannidis AG. Adversarial Learning for Feature Shift Detection and Correction. In Neural Information Processing Systems (NeurIPS). New Orleans, USA; In Press.