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Submitted
Geleta M, Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. Deep Variational Autoencoders for Population Genetics. Submitted;.
In Press
Barrabés M, Mas-Montserrat D, Geleta M, Giró-i-Nieto X, Ioannidis AG. Adversarial Learning for Feature Shift Detection and Correction. In Neural Information Processing Systems (NeurIPS). New Orleans, USA; In Press.
Dominguez A, Mas-Montserrat D, Bustamante C, Giró-i-Nieto X, Ioannidis AG. Neural ADMIXTURE: rapid population clustering with autoencoders. Nature Computational Science. In Press;.
2022
Perera M. Ancestry-conditioned Generative Models for Genotyping. Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. 2022 .
Mas-Montserrat D, Perera M, Barrabés M, Geleta M, Giró-i-Nieto X, Ioannidis AG. Generative Moment Matching Networks for Genotype Simulation. In 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 2022.  (2.95 MB)
Barrabés M. Machine Learning for Genomic Sequence Processing. Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. 2022 .
Bartusiak E, Barrabés M, Rymbe A, Gimbernat J, López C, Barberis L, et al.. Predicting Dog Phenotypes from Genotypes. In 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'22). 2022.  (1.17 MB)
Bernal O, Mas-Montserrat D, Giró-i-Nieto X, Ioannidis AG. SALAI-Net: species-agnostic local ancestry inference network. Bioinformatics. 2022;38.
2021
Geleta M, Mas-Montserrat D, Bustamante C, Giró-i-Nieto X, Ioannidis AG. Deep variational autoencoders for population genetics: applications in classification, imputation, dimensionality reduction, and novel lossless data compression. In American Society of Human Genetics (ASHG). Virtual: ASHG; 2021.
Dominguez A, Mas-Montserrat D, Bustamante C, Giró-i-Nieto X, Ioannidis AG. Neural ADMIXTURE: rapid population clustering with autoencoders. In 2021 Society for Molecular Biology & Evolution meeting (SMBEv2021). Virtual; 2021.  (1.76 MB)
Oriol B. Species-agnostic Local Ancestry Inference on Genomic Data with Convolutions. Mas-Montserrat D, Ioannidis AG, Giró-i-Nieto X. 2021.
Geleta M. Unsupervised learning with applications in genomic. Mas-Montserrat D, Ioannidis AG, Giró-i-Nieto X. 2021.